strain 43896 Search Results


strain 43896  (ATCC)
93
ATCC strain 43896
Strain 43896, supplied by ATCC, used in various techniques. Bioz Stars score: 93/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/strain+43896/Escherichia+coli+(Migula)+Castellani+and+Chalmers/pm11563509-161-19-18
Average 93 stars, based on 1 article reviews
strain 43896 - by Bioz Stars, 2026-09
93/100 stars
  Buy from Supplier
o78 strains  (ATCC)
92
ATCC o78 strains
Figure 2. Comparison of genomic coverages (%) and identities (%) of <t>O78</t> E. coli strains. A heatmap was constructed to represent the average nucleotide identity (ANI) and alignment coverage between O78 APEC and other RST strains. The values are visually depicted based on color intensity, with the alignment coverage ranging from red to green and the nucleotide identity represented by a color gradient from red to blue.
O78 Strains, supplied by ATCC, used in various techniques. Bioz Stars score: 92/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/strain+43896/Escherichia+coli%3B+serotype+o78%3Ak80%3Ah12/pm38136748-186-6-8
Average 92 stars, based on 1 article reviews
o78 strains - by Bioz Stars, 2026-09
92/100 stars
  Buy from Supplier
nonstec  (ATCC)
99
ATCC nonstec
Figure 2. Comparison of genomic coverages (%) and identities (%) of <t>O78</t> E. coli strains. A heatmap was constructed to represent the average nucleotide identity (ANI) and alignment coverage between O78 APEC and other RST strains. The values are visually depicted based on color intensity, with the alignment coverage ranging from red to green and the nucleotide identity represented by a color gradient from red to blue.
Nonstec, supplied by ATCC, used in various techniques. Bioz Stars score: 99/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/product/strain+43896/Escherichia+coli+(Migula)+Castellani+and+Chalmers/pm22568751-54-62-63
Average 99 stars, based on 1 article reviews
nonstec - by Bioz Stars, 2026-09
99/100 stars
  Buy from Supplier

Image Search Results


Figure 2. Comparison of genomic coverages (%) and identities (%) of O78 E. coli strains. A heatmap was constructed to represent the average nucleotide identity (ANI) and alignment coverage between O78 APEC and other RST strains. The values are visually depicted based on color intensity, with the alignment coverage ranging from red to green and the nucleotide identity represented by a color gradient from red to blue.

Journal: Antibiotics (Basel, Switzerland)

Article Title: Tracing the Evolutionary Pathways of Serogroup O78 Avian Pathogenic Escherichia coli .

doi: 10.3390/antibiotics12121714

Figure Lengend Snippet: Figure 2. Comparison of genomic coverages (%) and identities (%) of O78 E. coli strains. A heatmap was constructed to represent the average nucleotide identity (ANI) and alignment coverage between O78 APEC and other RST strains. The values are visually depicted based on color intensity, with the alignment coverage ranging from red to green and the nucleotide identity represented by a color gradient from red to blue.

Article Snippet: In the RST3-1_G4 genome type, three O78 strains (ATCC 43896, L3_E36, and 00-3279) were identified, and some of them were pathogenic and showed high genomic coverage/identity (98–99%/99.99%) and Antibiotics 2023, 12, 1714 12 of 23 similar mPPTs to each other (Table S2).

Techniques: Comparison, Construct

Figure 3. Evolutionary model based on the spacer sequences of CRISPRs in O78 APEC strains accord- ing to RST: (A) RST3-1, (B) RST4-4, and (C) RST21-1. The CRISPR spacers of genetically related strains of each RST were compared, and their progenitor–progeny relationships were hypothesized in terms of spacer contents. In the case of RST3-1 strains, E19057 and E123 may be different progenies of APEC O78 and may have lost different numbers of spacers in CRT2. In the case of RST4-4, E19025, E18005, and NCTC11129 may have lost different numbers of spacers in CRT1 and CRT2 of a hypothetical progenitor. A RST3-1_G2 strain, WS3294A, shares the same hypothetical progenitor of RST4-4, reflect- ing their evolutionary relatedness. Only RST4-4 strains E19025, E18005, and NCTC11129 acquired one spacer (CRT2_11). In the case of RST21-1, E14033 may be a progeny of hypothetical progenitor I, and APEC O2-211, PSU-O78, and E12049 are progenies of hypothetical progenitor II. All the RST21-1 strains may have experienced different deletions in CRT1 and CRT2.

Journal: Antibiotics (Basel, Switzerland)

Article Title: Tracing the Evolutionary Pathways of Serogroup O78 Avian Pathogenic Escherichia coli .

doi: 10.3390/antibiotics12121714

Figure Lengend Snippet: Figure 3. Evolutionary model based on the spacer sequences of CRISPRs in O78 APEC strains accord- ing to RST: (A) RST3-1, (B) RST4-4, and (C) RST21-1. The CRISPR spacers of genetically related strains of each RST were compared, and their progenitor–progeny relationships were hypothesized in terms of spacer contents. In the case of RST3-1 strains, E19057 and E123 may be different progenies of APEC O78 and may have lost different numbers of spacers in CRT2. In the case of RST4-4, E19025, E18005, and NCTC11129 may have lost different numbers of spacers in CRT1 and CRT2 of a hypothetical progenitor. A RST3-1_G2 strain, WS3294A, shares the same hypothetical progenitor of RST4-4, reflect- ing their evolutionary relatedness. Only RST4-4 strains E19025, E18005, and NCTC11129 acquired one spacer (CRT2_11). In the case of RST21-1, E14033 may be a progeny of hypothetical progenitor I, and APEC O2-211, PSU-O78, and E12049 are progenies of hypothetical progenitor II. All the RST21-1 strains may have experienced different deletions in CRT1 and CRT2.

Article Snippet: In the RST3-1_G4 genome type, three O78 strains (ATCC 43896, L3_E36, and 00-3279) were identified, and some of them were pathogenic and showed high genomic coverage/identity (98–99%/99.99%) and Antibiotics 2023, 12, 1714 12 of 23 similar mPPTs to each other (Table S2).

Techniques: CRISPR

Figure 5. Theoretical interconnections between O78 APEC strains (n = 32) with different contents of antibiotic resistance genes (genotypes). This schematic illustrates relationships between differ- ent genotypes.

Journal: Antibiotics (Basel, Switzerland)

Article Title: Tracing the Evolutionary Pathways of Serogroup O78 Avian Pathogenic Escherichia coli .

doi: 10.3390/antibiotics12121714

Figure Lengend Snippet: Figure 5. Theoretical interconnections between O78 APEC strains (n = 32) with different contents of antibiotic resistance genes (genotypes). This schematic illustrates relationships between differ- ent genotypes.

Article Snippet: In the RST3-1_G4 genome type, three O78 strains (ATCC 43896, L3_E36, and 00-3279) were identified, and some of them were pathogenic and showed high genomic coverage/identity (98–99%/99.99%) and Antibiotics 2023, 12, 1714 12 of 23 similar mPPTs to each other (Table S2).

Techniques: